Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | Set_04_DMproB_versus_LMproB.phenotype_DMproB_versus_LMproB.cls #DMproB_versus_LMproB |
| Phenotype | phenotype_DMproB_versus_LMproB.cls#DMproB_versus_LMproB |
| Upregulated in class | LMproB |
| GeneSet | NCI_PDGFR-ALPHA SIGNALING PATHWAY |
| Enrichment Score (ES) | -0.8740526 |
| Normalized Enrichment Score (NES) | -1.5923831 |
| Nominal p-value | 0.012448133 |
| FDR q-value | 0.4496384 |
| FWER p-Value | 0.914 |
| PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|---|
| 1 | GRB2 | 20149 | 1117 | 0.156 | -0.0167 | No | ||
| 2 | CRKL | 4560 | 2649 | 0.042 | -0.0875 | No | ||
| 3 | CSNK2A1 | 14797 | 2823 | 0.036 | -0.0869 | No | ||
| 4 | CRK | 4559 1249 | 2908 | 0.034 | -0.0820 | No | ||
| 5 | RAPGEF1 | 4218 2860 | 3660 | 0.020 | -0.1169 | No | ||
| 6 | SOS1 | 5476 | 5345 | 0.008 | -0.2051 | No | ||
| 7 | PIK3R1 | 3170 | 7286 | 0.003 | -0.3086 | No | ||
| 8 | ITGAV | 4931 | 7471 | 0.003 | -0.3177 | No | ||
| 9 | PDGFRA | 16824 | 8042 | 0.002 | -0.3479 | No | ||
| 10 | PIK3CA | 9562 | 8243 | 0.001 | -0.3583 | No | ||
| 11 | SHB | 10493 | 8833 | 0.000 | -0.3899 | No | ||
| 12 | PLCG1 | 14753 | 9261 | -0.001 | -0.4127 | No | ||
| 13 | CAV1 | 8698 | 13216 | -0.009 | -0.6227 | No | ||
| 14 | SHC1 | 9813 9812 5430 | 13709 | -0.012 | -0.6459 | No | ||
| 15 | CAV3 | 17336 | 14092 | -0.014 | -0.6625 | No | ||
| 16 | IFNG | 19869 | 14271 | -0.015 | -0.6678 | No | ||
| 17 | JAK1 | 15827 | 16254 | -0.058 | -0.7583 | Yes | ||
| 18 | JUN | 15832 | 18408 | -0.531 | -0.7265 | Yes | ||
| 19 | FOS | 21202 | 18435 | -0.608 | -0.5591 | Yes | ||
| 20 | SRF | 22961 1597 | 18585 | -2.048 | 0.0017 | Yes |
